“bedtools” is a versatile set of command-line tools designed for genomic analysis tasks. It serves as a “swiss-army knife” for manipulating, analyzing, and processing genomic data in various file formats such as BAM, BED, GFF/GTF, and VCF. “bedtools” is widely used in bioinformatics and genomics research to perform tasks like data intersection, grouping, conversion, and […]
beanstalked Command Examples (A simple and generic work-queue server)
“beanstalkd” is a simple and generic work-queue server that provides a reliable and efficient system for managing and processing asynchronous jobs or tasks. It is designed to handle a large number of jobs efficiently, making it suitable for various applications and systems that require job scheduling, task management, or message passing. The primary purpose of […]
bcomps Command Examples (Decompose graphs into their biconnected components)
“bcomps” is a command-line tool that decomposes graphs into their biconnected components. It is part of the Graphviz suite, which provides a set of powerful tools for working with graphs and visualizing them. The Graphviz suite includes various tools such as “acyclic,” “comps,” “edgepaint,” “gvcolor,” “gvpack,” “mingle,” “nop,” “sccmap,” “tred,” and “unflatten,” each serving a […]
bc: An arbitrary precision calculator language (Command Examples)
“bc” is an arbitrary precision calculator language that provides a powerful tool for performing mathematical calculations with arbitrary precision. Unlike traditional calculators that are limited by the precision of fixed-width number representations, “bc” allows users to work with numbers to an arbitrary number of decimal places or significant digits. The primary purpose of “bc” is […]
bb Command Examples (Native Clojure interpreter for scripting)
“bb” is a native Clojure interpreter specifically designed for scripting purposes. It allows developers to write and execute Clojure code directly from the command line, making it convenient for performing various scripting tasks and automating workflows. Clojure is a dynamic, functional programming language that runs on the Java Virtual Machine (JVM) and provides seamless integration […]
bazel: Open-source build and test tool similar to Make, Maven, and Gradle.
“Bazel” is an open-source build and test tool that provides a flexible and efficient framework for building software projects. It is designed to handle large-scale projects with multiple programming languages, platforms, and dependencies. Similar to other build tools like Make, Maven, and Gradle, Bazel automates the process of compiling source code, managing dependencies, and running […]
batch: Execute commands at a later time when the system load levels permit
“batch” is a command-line utility that allows users to schedule the execution of commands or scripts at a later time when the system load levels permit. It provides a way to defer the execution of resource-intensive tasks to times when the system is less busy, ensuring smoother operation and optimal resource allocation. When executing commands […]
bat: Print and concatenate files
“bat” is a command-line tool that serves as a modern alternative to the traditional “cat” command for printing and concatenating files in the terminal. It offers additional features such as syntax highlighting and Git integration, enhancing the readability and usability of file contents. Similar to the “cat” command, “bat” can display the contents of one […]
bastet: Clone of the game Tetris in the terminal
“bastet” is a clone of the popular game Tetris that can be played directly in the terminal. It is designed to replicate the gameplay and mechanics of the original Tetris game while providing a text-based, command-line interface for a nostalgic gaming experience. In “bastet,” players control the falling tetrominoes, which are geometric shapes made up […]
bashmarks: Save and jump to commonly used directories using 1 character commands
“bashmarks” is a utility that allows users to conveniently save and quickly navigate to frequently used directories using short, single-character commands in the Bash shell. It enhances the efficiency and convenience of directory navigation by providing an easy way to bookmark and access specific locations within the file system. With “bashmarks,” users can assign a […]